Request a New Data Source¶
Don't see the data you need? Tell us and we'll build the connector.
What we'll ask you¶
The form will ask for:
| Field | Why we need it |
|---|---|
| Source Name | What database/resource |
| URL | Where to download it |
| Description | What biological question it answers |
| Data Format | TSV, Parquet, JSON, XML, OBO, etc. |
| Identifiers | What IDs it uses (UniProt, Ensembl, MONDO, etc.) — determines join strategy |
| Relationship Type | Protein-disease, PPI, drug-target, etc. |
| Key Columns | The important fields in the data |
| Size | How big is it |
| Access Type | Public download, needs registration, API-only, etc. |
Currently Supported (28 sources)¶
| Category | Sources |
|---|---|
| Proteins & Targets | UniProt, STRING, InterPro, ChEMBL, Complex Portal, MarkerDB, PDB/SIFTS |
| Disease Associations | Open Targets, DISEASES 2.0, ClinVar, ClinicalTrials.gov, TTD |
| Ontologies | MONDO, Disease Ontology, EFO, Gene Ontology, MeSH, ICD-10-CM |
| Expression | GTEx, HPA/Olink |
| Genomics | gnomAD, Ensembl, dbSNP, UK Biobank |
| Drugs | ChEMBL, PubChem, TTD, OpenFDA |
| Competitors | MSD, Quanterix, Alamar, Nomic, SomaLogic |